Overview
API
About scReadSim
Tutorials
Install required softwares of scReadSim
scReadSim for 10x scATAC-seq
scReadSim for 10x scRNA-seq
scReadSim for single-cell multiomics
scReadSim for scATAC-seq from multiple samples/conditions
scReadSim for scRNA-seq from multiple samples/conditions
scReadSim for scRNA-seq with condition effect
scReadSim for 10x scRNA-seq (exon only)
scReadSim for 10x scATAC-seq with user-designed open chromatin regions
scReadSim
API
scReadSim.Utility.bam2MarginalCount
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scReadSim.Utility.bam2MarginalCount
scReadSim.Utility.
bam2MarginalCount
(
bed_file
,
sam_filename
)
[source]
Count read overlapped for each feature from input bed file.