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Overview

  • API
  • About scReadSim

Tutorials

  • Install required softwares of scReadSim
  • scReadSim for 10x scATAC-seq
  • scReadSim for 10x scRNA-seq
  • scReadSim for single-cell multiomics
  • scReadSim for scATAC-seq from multiple samples/conditions
  • scReadSim for scRNA-seq from multiple samples/conditions
  • scReadSim for scRNA-seq with condition effect
  • scReadSim for 10x scRNA-seq (exon only)
  • scReadSim for 10x scATAC-seq with user-designed open chromatin regions
scReadSim
  • Overview: module code

All modules for which code is available

  • scReadSim.DoubletDetection
  • scReadSim.GenerateSyntheticCount
  • scReadSim.GenerateSyntheticCount_MultiOmics
  • scReadSim.Utility
  • scReadSim.scATAC_GenerateBAM
  • scReadSim.scRNA_GenerateBAM

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